MHC Allele Sharing between Canid Species including Ethiopian Wolves and African Wild Dogs
Tufts' Canine and Feline Breeding and Genetics Conference, 2009
Lorna J. Kennedy1; Andrew Kitchener2; Karen Laurenson3; Alan D. Radford4; Clare Marsden5; Barbara Mable5; George M. Happ6
1University of Manchester, Manchester, UK; 2National Museums of Scotland, Edinburgh, Scotland; 3Frankfurt Zoological Society, Serengeti, Africa; 4University of Liverpool, Liverpool, UK; 5Environmental and Evolutionary Biology, University of Glasgow, Scotland; 6Institute of Arctic Biology, University of Alaska, Fairbanks, AK

The Major Histocompatibility Complex contains highly polymorphic genes, which are critical in regulating the immune response. We have investigated MHC genes in a variety of wild canids, including Ethiopian wolves and African wild dogs. We also tested whether intronic primers designed for the domestic dog amplify MHC genes in other canids.

Previous data have shown that some DLA class II alleles are shared between the domestic dog and its ancestor, the Grey Wolf. However, it was not clear whether there would be allele sharing between any other canids and the domestic dog, see Table 1.

Sequence based typing (SBT) was used to characterise DLA haplotypes in 120 Ethiopian wolves. Eight haplotypes were identified, which included four DRB1, two DQA1 and five DQB1 alleles. One DQA1 and one DQB1 allele had previously been found in domestic dogs, and one DQB1 allele has previously been found in grey wolves, see Table 2.

SBT was used to characterise DLA alleles in 120 African wild dogs. We identified 18 DRB1, one DQA1 and two DQB1 alleles, none of which had previously been seen in domestic dogs, see Table 3.

Table 1: Allele Sharing between 175 North American Grey Wolves and >5000 Domestic Dogs

 

GW only

GW and dog

Total

DLA-DRB1

14

3

17

DLA-DQA1

4

8

12

DLA-DQB1

9

6

15

DLA-DQ haplotypes

10

7

17

3-locus Haplotypes

26

2

28

Table 2: Allele Sharing between 120 Ethiopian Wolves Grey Wolves and Domestic Dogs

 

EW only

EW and dog

EW and GW

Total

DLA-DRB1

4

0

0

4

DLA-DQA1

1

1

0

2

DLA-DQB1

3

1

1

5

DLA-DQ haplotypes

5

1

0

6

3-locus Haplotypes

8

0

0

8

Table 3: Allele Sharing between 120 African Wild Dogs, other Canids and Domestic Dogs

 

awd only

awd and dog

Total

DLA-DRB1

21

0

21

DLA-DQA1

1

0

1

DLA-DQB1

2

0

2

DLA-DQ haplotypes

5

1

5

3-locus Haplotypes

21

0

21

Screening a panel of canids using dog intronic primers revealed several different patterns of reactions. The data do not indicate whether a gene is present, but just whether the introns are similar enough to the domestic dog to allow amplification. DNA from maned wolf amplified with DRA and DQA1, while Kit Fox DNA amplified with DQA1 only. Arctic fox DNA also amplified DQA1, but has not been tested with the others yet. Two fox species were positive for all except DRB1 and the red fox was also negative for DRB1. Other canid DNAs, including grey wolf, Ethiopian wolf, African wild dog, Döhle, Bush dog and Arabian wolf, amplified with all four primer pairs.

Table 4: Amplification of MHC Genes in Other Canids Using Dog Primers

****SEE ORIGINAL TO COLOR TABLE CELLS*****

Species

Common name

DRA

DRB1

DQA1

DQB1

Canis lupus

Grey wolf

+

+

+

+

Canis simensis

Ethiopian wolf

+

+

+

+

Cuon alpinus

Döhle

+

+

+

+

Lycaon pictus

African wild dog

+

+

+

+

Speothos venaticus

Bush dog

+

+

+

+

Chrysocyon brachyurus

Maned wolf

+

-

+

-

Cerdocyon thous

Crab-eating fox

+

-

+

+

Octocyon megalotis

Bat-eared fox

+

-

+

+

Vulpes vulpes

Red fox

nt

-

nt

nt

Vulpes macrotis

Kit fox

+

-

-

-

Alopex lagopus

Arctic fox

+

-

-

-

Proteles cristatus

Aardwolf*

-

-

-

-

* The Aardwolf is not canid, it is a hyena, and was used as a control

These data provide interesting additional information on how closely related these different canids may be.

Discussion

 Using dog intronic primers can help identify how closely related other canids are to the domestic dog

 The more distantly related a canid to the domestic dog or grey wolf, the more varied the MHC gene introns are, and the less likely their MHC genes will amplify with dog primers

 Exonic primers amplify DLA-DRB1 and DQB1 in the Arctic Fox, therefore these genes are not missing

 DLA-DQA1 and DQB1 appear to be more conserved than DLA-DRB1

 Other canids do not lack MHC genes, they have different intron sequences

 Closely related canids share alleles

 There is allele sharing between canids, but it reduces with evolutionary distance

 

Speaker Information
(click the speaker's name to view other papers and abstracts submitted by this speaker)

Lorna J. Kennedy
Centre for Integrated Genomic Medical Research (CIGMR)
Manchester, UK


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