Comparison of Aging Techniques in Bottlenose Dolphins (Tursiops truncatus)
IAAAM 2021
Ashley Barratclough1*; Forrest Gomez1; Lori Schwacke1; Abby McClain1; Daniel Garcia-Parraga2; Celeste Parry1; Steve Horvath3,4; Wayne McFee5; Cynthia Smith1
1National Marine Mammal Foundation, San Diego, CA, USA; 2Fundación Oceanogràfic de la Comunidad Valenciana, Valencia, Spain; 3Department of Biostatistics, Fielding School of Public Health, University of California—Los Angeles, Los Angeles, CA, USA; 4Department of Human Genetics, David Geffen School of Medicine, University of California—Los Angeles, Los Angeles, CA, USA; 5National Ocean Service, Center for Coastal Environmental Health and Biomolecular Research, Charleston, SC, USA

Abstract

Age determination of wild cetaceans influences interpretation of both veterinary health assessments and biological data. Historically, aging methodologies included morphometric data and growth layer group (GLG) analysis post tooth extraction.1,2 Recently, dental and pectoral flipper radiography for non-invasive age estimation has proven useful in bottlenose dolphins (Tursiops truncatus).3,4 These methods require physical examinations during live animal health assessments, or post-mortem evaluations.5 We propose to compare epigenetic analysis of skin, which can be remotely sampled, to tooth and pectoral flipper radiography age estimations on known aged dolphins.6 Epigenetics is the study of chemical modifications to DNA and is used to create species specific aging clocks with expected changes occurring to DNA over time.7 Methods were compared on bottlenose dolphins of known age from the U.S. Navy Marine Mammal Program. Epigenetic analysis is currently underway; DNA methylation arrays were profiled using a custom Infinium methylation array (HorvathMammalMethylChip40) based on 37492 CpG sites. Tooth analysis is pending due to COVID lab closures.a We hypothesize that epidermal epigenetics is the most accurate methodology across the entire dolphin lifespan, with pectoral radiography the most accurate methodology in dolphin <5 years of age due to the low standard error of ±0.35 years in females and ±0.87 years in males.3 Future application of epigenetic aging to larger or endangered cetaceans, could allow for the filling of critical data gaps in population demographics, aiding conservation efforts. Use of this technique for the comparison of biological and chronical aging in managed and wild cetaceans, is also possible.

Acknowledgements

The authors wish to thank the involvement of Dr. Eric Jensen and the U.S. Navy Marine Mammal Program dolphins, biotechnicians, and managers, and the National Marine Mammal Foundation trainers, veterinary and medical records staff who facilitated this study. This research was made possible by a generous grant from NOAA Prescott funding. In addition the authors would like to thank Veronica Cendejas and Brittany Novick for their help with sample management.

Endnotes

a. All results, data analysis and interpretation are expected by May 2021.

*Presenting author

Literature Cited

1.  Barratclough A, Sanz-Requena R, Marti-Bonmati L, Schmitt TL, Jensen E, García-Párraga D. 2019. Radiographic assessment of pectoral flipper bone maturation in bottlenose dolphins (Tursiops truncatus), as a novel technique to accurately estimate chronological age. PLoS One 14(9):e0222722.

2.  Barratclough A, Wells RS, Schwacke LH, Rowles TK, Gomez FM, Fauquier DA, Sweeney JC, Townsend FI, Hansen LJ, Zolman ES. Balmer BC, Smith CR. 2019. Health assessments of common bottlenose dolphins (Tursiops truncatus): past, present, and potential conservation applications. Front Vet Sci 6:444.

3.  Beal A, Kiszka JJ, Wells, RS, Eirin-Lopez JM. 2019. The bottlenose dolphin epigenetic aging tool (BEAT): a molecular age estimation tool for small cetaceans. Front Mar Sci (6):561.

4.  Herrman JM, Morey JS, Takeshita R, Guise SD, Wells RS, McFee W, Speakerman T, Townsend F, Smith CR, Rowles T, Schwacke L. 2020. Age determination of common bottlenose dolphins (Tursiops truncatus) using dental radiography pulp:tooth area ratio measurements. PLoS One 15(11):e0242273.

5.  Hohn AA, Scott, MD, Wells RS, Sweeney JC, Irvine AB. 1989. Growth layers in teeth from known‐age, free‐ranging bottlenose dolphins. Mar Mamm Sci 5(4):315–342.

6.  Wells RS. 2014. Social Structure and Life History of Bottlenose Dolphins Near Sarasota Bay, Florida: Insights from Four Decades and Five Generations. In: Yamagiwa J, Karczmarski L, editors. Primates and Cetaceans. Tokyo: Springer. p 149–172.

7.  Horvath S. 2013. DNA methylation age of human tissues and cell types. Genome Biol 14(10):3156.

 

Speaker Information
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Ashley Barratclough
National Marine Mammal Foundation
San Diego, CA, USA


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